Manceau, M., Domingues, V., Linnen, C., Rosenblum, E., & Hoekstra, H. (2010). Convergence in pigmentation at multiple levels: mutations, genes and function. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 365(1552), 2439-50. https://doi.org/10.1098/rstb.2010.0104 (Original work published 2010)

Weber, J., Peters, M., Tsyusko, O., Linnen, C., Hagen, C., Schable, N., … Glenn, T. (2010). Five Hundred Microsatellite Loci for Peromyscus. Conservation Genetics (Print), 11(3), 1243-1246. https://doi.org/10.1007/s10592-009-9941-x (Original work published 2010)

Linnen, C., & Hoekstra, H. Measuring natural selection on genotypes and phenotypes in the wild. Cold Spring Harbor Symposia on Quantitative Biology, 74, 155-68. https://doi.org/10.1101/sqb.2009.74.045 (Original work published 2009)

Linnen, C., Kingsley, E., Jensen, J., & Hoekstra, H. (2009). On the origin and spread of an adaptive allele in deer mice. Science (New York, N.Y.), 325(5944), 1095-8. https://doi.org/10.1126/science.1175826 (Original work published 2009)

Linnen, C., Poh, Y., Peterson, B., Barrett, R., Larson, J., Jensen, J., & Hoekstra, H. (2013). Adaptive evolution of multiple traits through multiple mutations at a single gene. Science (New York, N.Y.), 339(6125), 1312-6. https://doi.org/10.1126/science.1233213 (Original work published 2013)

Mallarino, R., Linden, T., Linnen, C., & Hoekstra, H. (2017). The role of isoforms in the evolution of cryptic coloration in Peromyscus mice. Molecular Ecology, 26(1), 245-258. https://doi.org/10.1111/mec.13663

Pfeifer, S., Laurent, S., Sousa, V., Linnen, C., Foll, M., Excoffier, L., … Jensen, J. (2018). The Evolutionary History of Nebraska Deer Mice: Local Adaptation in the Face of Strong Gene Flow. Molecular Biology and Evolution, 35(4), 792-806. https://doi.org/10.1093/molbev/msy004 (Original work published 2018)